Developing an Intelligent Farm System to Automate Real-time Detection of Fungal Diseases in Mushrooms

Main Article Content

Chatklaw Jareanpon
Suchart Khummanee
Patharee Sriputta
Peter Scully

Abstract

Mushrooms are economically valuable crops of high nutritional value. However, during cultivation they are continually threatened by fungal diseases, even in controlled-condition farm ecosystems. Fungal diseases significantly affect mushroom growth and can rapidly contaminate an entire crop. Farmer inspections can be hazardous to farmer health. This paper contributes an automated fungal disease detection system for the Sajor-caju mushrooms together with an intelligent farm system for precise cultivation environment control. The objective was to create and test a detection system that could detect fungal diseases rapidly, reduce farmer exposure to fungal spores, and alert farmers when fungal disease was detected. The system is composed of three parts: (i) a high-precision environment control system, (ii) an innovative imaging robot system, and (iii) a real-time fungal disease prognosis system using deep learning, with an alarm system. The trial results show that the real-time disease prognosis system has 94.35% precision (89.47% F1-score, n=13,500), and its twice daily inspections detect and report fungal disease typically within 6 to 12 h. The innovative farm’s overall capability for mushroom cultivation (environment control) is regarded as excellent and has precise control (99.6% capability, over 3-months). The innovative imaging robot’s overall operational trial performance is effective (at 99.7%). Moreover, the system effectively notifies farmers via smartphone when a fungal disease is detected.

Article Details

Section
Original Research Articles

References

Stamets, P., 2011.Growing Gourmet and Medicinal Mushrooms. California: Ten speed press.

Chang, S.T. and Wasser, S.P., 2018. Current and future research trends in agricultural and biomedical applications of medicinal mushrooms and mushroom products (review). International Journal of Medicinal Mushrooms, 20(12), 1121-1133, https://doi.org/10.1615/IntJMedMushrooms.2018029378.

Alam, N., Amin, R., Khan, A., Ara, I., Shim, M.J., Lee, M. W., Lee, U.Y. and Lee, T.S., 2009. Comparative effects of oyster mushrooms on lipid profile, liver and kidney function in hypercholesterolemic rats. Mycobiology, 37(1), 37-42. https://doi.org/10.4489/MYCO.2009.37.1.037.

Mahmud, M.S.A., Buyamin, S., Mokji, M.M. and Abidin, M.S.Z., 2018. Internet of things based smart environmental monitoring for mushroom cultivation. Indonesian Journal of Electrical Engineering and Computer Science, 10(3), 847-852. https://doi.org/10.11591/ijeecs.v10.i3.pp847-852.

Raja, S.P., Rozario, A.R., Nagarani, S. and Kavitha, N., 2018. Intelligent mushroom monitoring system. International Journal of Engineering and Technology, 7(2.33), 1238-1242.

Khummanee, S., Wiangsamut, S., Sorntepa P. and Jaiboon C., 2018. Automated smart farming for orchids with the internet of things and fuzzy logic. International Conference on Information Technology (InCIT), Khon Kaen, Thailand, December 24-26, 2018, pp. 1-6.

Wiangsamut, S., Phatthanaphong, C. and Suchart, K., 2019. Chatting with plants (orchids) in automated smart farming using IoT, fuzzy logic and chatbot. Advances in Science, Technology and Engineering Systems Journal, 4(5), 163-173.

Kassim, M.R.M., Harun, A.N., Yusoff, I.M., Mat, I., Kuen, C.P. and Rahmad, N., 2017. Applications of wireless sensor networks in Shiitake mushroom cultivation. 11th International Conference on Sensing Technology, Sydney, Australia, December 24-26, 2017, pp. 1-6.

Chieochan, O., Saokaew, A. and Boonchieng, E., 2017. IOT for smart farm: A case study of the Lingzhi mushroom farm at Maejo University. 14th International Joint Conference on Computer Science and Software Engineering (JCSSE), NakhonSiThammarat, Thailand, July 12-14, 2017, pp. 1-6.

Sorenson, W.G., 1999. Fungal spores: hazardous to health? Environmental Health Perspectives, 107(Suppl 3), 469-472, https://doi.org/10.1289/ehp.99107s3469.

Beyer, D., 2023. Green Mold of Mushrooms. [online] Available at: https://extension.psu.edu/ green-mold-of-mushrooms.

Tinkercad, 2022. Autodesk Tinkercad. [online] Available at: https://www.tinkercad.com.

Yang, K., Han, Y., Ma, Y. and Yang, L., 2017. The design and implement of monitoring system for mushroom greenhouses based on intelligent agriculture. International Conference on Computer Systems, Electronics and Control (ICCSEC), Dalian, China, December 25-27, 2017, pp. 695-699.

Ghavate, S. and Joshi, H., 2020. Smart Farming using IoT and Machine Learning with Image. [online] Available at: https://easychair.org/publications/preprint/w3Sg.

Pooja, V., Das, R. and Kanchana, V., 2017. Identification of plant leaf diseases using image processing techniques. IEEE Technological Innovations in ICT for Agriculture and Rural Development (TIAR), Chennai, India, April 7-8, 2017, pp. 130-133.

Girshick, R., Donahue. J., Darrell. T. and Malik. J., 2014. Rich feature hierarchies for accurate object detection and semantic segmentation. Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, Columbus, USA, June 23-28, 2014, pp. 580-587.

Jin, X-B., Yu, X-H., Wang, X-Y., Bai, Y-T., Su, T-L. and Kong, J-L., 2020. Deep learning predictor for sustainable precision agriculture based on internet of things system. Journal of Sustainability, 12(4), https://doi.org/10.3390/su12041433.

Noe, S.M., Zin, T.T., Tin, P. and Kobayashi, I., 2022. Automatic detection and tracking of mounting behavior in cattle using a deep learning-based instance segmentation model. International Journal of Innovative Computing, Information and Control, 18(1), 18211-18220.

Gandhi, R., 2018. R-CNN, Fast R-CNN, Faster R-CNN, YOLO Object Detection Algorithms. [online] Available at: https://towardsdatascience.com/r-cnn-fast-r-cnn-faster-r-cnn-yolo-object-detection-algorithms-36d53571365e.

Huang, G., Liu, Z., Maaten, L.V.D. and Weinberger, K.Q., 2017. Densely connected convolutional networks. Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, Honolulu, USA, July 21-26, 2017, pp. 4700-4708.

He, K., Zhang, X., Ren, S. and Sun, J., 2016. Deep residual learning for image recognition. Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, Las Vegas, USA, June 27-30, 2016, pp. 770-778.

Szegedy, C., Vanhoucke, V., Ioffe, S., Shlens, J. and Wojna, Z., 2016. Rethinking the inception architecture for computer vision. Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition, Las Vegas, USA, June 27-30, 2016, pp. 2818-2826.

Simonyan, K. and Zisserman, A., 2014. Very Deep Convolutional Networks for Large-scale Image Recognition. [online] Available at: https://arxiv.org/abs/1409.1556.

Chollet, F., 2022. About Keras. [online] Available at: https://keras.io.

Google, 2022. TensorFlow. [online] Available at: https://www.tensorflow.org.

Dataquest, 2022. A Complete Guide to Python Virtual Environments. [online] Available at: https://www.dataquest.io/blog/a-complete-guide-to-python-virtual-environments/.