Study of fungal metagenomics and potential to produce secondary metabolites fungus isolated from Perionyx sp. 1 gut

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Rungroj Kraisittipanit
Arnat Tancho
Supatida Aumtong
Piyanuch Niamsup
Srikanjana Klayraung
Wasin Chareantantanakul

Abstract

The aim of this research was to identify the fungi species from Thai economic earthworm gut (Perionyx sp. 1) and testing on the efficiency to produce secondary metabolites (IAA, GA, Hydroxamate siderophore). As metagenomics level, revealed 3 phyla 8 classes 32 genera and 49 species. On the other hand, the conventional method could collect 11 different fungal isolates using ITS1. i.e., Talaromyces wortmannii (YL1), Chaetomium globosum (YL2), T. indioticus (YL3), T. angelicus (RL1), Trichoderma sp. (RL2), Aspergillus niger (RL3), Penicillium citrinum (Pe1), A.  fumigatus (Pe2), A. flavus (Pe3), Humicola sp. (Pe5) and Fusarium sp. (Pe6). Three secondary metabolites (IAA, GA, Hydroxamate siderophore) were examined. The result showed that the PDBt added 0.4% L-tryptophan could produce IAA as 36.58 µg/ml higher than without. The GA showed the metabolite secretion related to IAA. However, the average of all fungal isolates could produce hydroxamate as 180.993 µg/ml and the RL3 isolate (Aspergillus niger) was the best fungi producing hydroxamate as 1,629.90 ± 0.0128 µg/ml. Furthermore, RL3 supernatant mixed iron solution (1:103) could stimulate the growth of green pea shoot more than outers, all of which confirm that within the intestinal gut of Perionyx sp.1 compose of effective fungi which can stimulate plant growth.

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How to Cite
Kraisittipanit, R. ., Tancho, A. ., Aumtong, S. ., Niamsup, P. ., Klayraung, S. ., & Chareantantanakul, W. (2021). Study of fungal metagenomics and potential to produce secondary metabolites fungus isolated from Perionyx sp. 1 gut. Khon Kaen Agriculture Journal, 50(3), 843–855. retrieved from https://li01.tci-thaijo.org/index.php/agkasetkaj/article/view/248406
Section
บทความวิจัย (research article)

References

Barlier, I., M. Kowalczyk, A. Marchant, K. Ljung, R. Bhalerao, M. Bennett, G. Sandberg, and C. Bellini. 2000. The SUR2 gene gene of Arabidopsis thaliana encodes the cytochrome P450 CYP83B1, a modulator of auxin homeostasis. Proceedings of the National Academy of Science of the United States of America. 97: 14819-14824.

Bilkey, I.S., S. Karakoc, and N. Aksoz. 2010. Indole-3-acetic and gibberellic acid production in Aspergillus niger. Turkish Journal of Biology. 34: 313-318.

Caron, M., C.L. Patten, and S. Ghosh. 1995. Effects of plant growth promoting rhizobacteria Pseudomonas putida GR-122 on the physiology of Canolla roots. Proceedings of Growth Regulation Society of America 2nd edition. Society press, Madison, Wisconsin.

Chowdhury, A., A. K. Hazra, S. Mahajan, and J. Choudhury. 2007. Microbial Community of Earthworm (Perionyx excavatus Perrier) gut, cast and adjacent soil in two different field of west Bengal. Records of the Zoological Survey of India. 107(4): 101-113.

Hasan, H.A.H. 2002. Gibberellin and auxin production by plant root fungi and their biosynthesis under salinity-calcium interaction. Rostlinna Vyroba. 3: 101-106.

Haydon, A.H., W.B. Davis. J.E.L. Arceneaux, and B.R. Byers. 1973. Hydroxamate recognition during iron transport from hydroxamate ironchelates. Jornal of Bacteriology. 115: 912-918.

Hilbert, M., L.M. Voll, Y. Ding, J. Hofmann, M. Sharma, and A. Zuccaro. 2012. Indole derivative production by the root endophyte Piriformospora indica is not required for growth promotion but biotrophic colonization of barley roots. New Phytologist. 196: 520-534.

Holbrook, A.A., W.J. Edge. And F. Bailey. 1961. Spectrophotometric method for determination of gibberellic acid. American Chemical Society. 28: 159-167.

Lynch, J.M., Vaughan, D. and Malcom, R.E. 1985. Origin, Nature and Biological Activity of Aliphatic Substances and Growth Hormones Found in Soil Organic Matter and Biological Activity. 16: 151-174.

Mano, Y., and K. Nemoto. 2012. The pathway of auxin biosynthesis in plants. Journal of Experimental Botany 63: 2853-2872.

Mikkelsen, M.D., C.H. Hansen, U. Wittstock, and B.A. Halkier. 2000. Cytochrome P450 CYP79B2 from Arabidopsis catalyzes the conversion of tryptophan to indole-3-acetaldoxine, a precursor of indole glucosinolates and indole-3-acetic acid, Journal of Biological Chemistry. 275: 33712-33717.

Nafisi, M., S. Goregaoker, C.J. Botanga, E. Glawischnig, C.E. Olsen, B.A. Halkier, and J. Glazebrook. 2007. Arabidopsis cytochrome P450 monooxygenase 71A13 catalyzes the conversion of indole-3-acetaldoxine in camelexin. Plant Cell. 19: 2039-2052.

Srivastava, L.M.2002.Plant growth and development. Hormones and the Environment. Academic Press. New York.

Suleerak, A., T. Arnat, N. Piyanuch, and R. Pattaraporn. 2016. The Potential of Bacteria Isolated from Earthworm Intestines, Vermicompost and Liquid Vermicompost to Produce Indole- 3- acetic acid (IAA). Journal of Agricultural Technology. 12(2): 229-239

Taiz, L. and E. Zeiger. 2010. Plant physiology. The Benjamin/Cummings Publishing Co. Inc., California.

Tancho, A. 2013. Natural Farming. Chiang Mai: Trio Advertising and Media Co., Ltd.

Tsavkelova, E.A., T.A. Cherdyntseva, S.G. Botin, And A.l. Netrusov. 2007. Bacteria associated with orchid roots and microbial production of auxin. Microbiological Research. 162: 69-76.